dhtslib.faidx

Undocumented in source.

Members

Enums

CoordSystem
enum CoordSystem

Coodinate Systems, since htslib sequence fetching methods surprisingly use zero-based, closed

Functions

buildFastaIndex
bool buildFastaIndex(string fn, string fnfai, string fngzi)

Build index for a FASTA or bgzip-compressed FASTA file.

Structs

IndexedFastaFile
struct IndexedFastaFile

FASTA file with .fai or .gzi index

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