IndexedFastaFile.opIndex

Fetch sequence in region by assoc array-style lookup: Uses htslib string region parsing string sequence = fafile["chr2:20123-30456"]

auto opIndex(string ctg, Tuple!(Coordinate!bs, OffsetType) coords)
auto opIndex(string ctg, Tuple!(OffsetType, OffsetType) coords)
auto opIndex(string ctg, OffsetType endoff)
auto opIndex(string region)
struct IndexedFastaFile
auto
opIndex
(
string region
)
auto opIndex(string contig, Interval!cs coords)

Meta

Source

See Implementation

dhtslib faidx IndexedFastaFile constructors

this

functions

properties

nSeq