RecordReader

Range that allows reading a record based format via BGZFile. Needs a record type that encompasses only one line of text. Rectype could be GFF3Record, BedRecord ... This is a sister struct to dhtslib.tabix.RecordReaderRegion.

struct RecordReader (

RecType

) {

BGZFile file;

ReturnType!(this.initializeRange) range;

auto initializeRange();

RecType front();

void popFront();

auto empty();

}

Constructors

this this(string fn): string filename ctor

Postblit

this(this) this(this): Explicit postblit to avoid https://github.com/blachlylab/dhtslib/issues/122

Members

Functions

empty auto empty(): is range done
front RecType front(): returns RecType
initializeRange auto initializeRange(): copy the BGZFile.byLineCopy range
popFront void popFront(): move the range

Variables

emptyLine bool emptyLine;: Undocumented in source.
file BGZFile file;: file reader
header string header;: keep the header
range ReturnType!(this.initializeRange) range;: file reader range