SAMWriter

Encapsulates a SAM/BAM/CRAM, but as write-only

struct SAMWriter {

string filename;

bam_hdr_t* header;

this(T f, bam_hdr_t* header, SAMWriterTypes t, int extra_threads);

void close();

void write(SAMRecord* rec);

}

Constructors

this this(T f, bam_hdr_t* header, SAMWriterTypes t, int extra_threads): Create a representation of SAM/BAM/CRAM file from given filename or File

Destructor

~this ~this(): Undocumented in source.

Postblit

this(this) this(this): disallow copying

Members

Functions

close void close(): close file
write void write(SAMRecord* rec): write out to disk

Variables

filename string filename;: filename; as usable from D
header bam_hdr_t* header;: header struct

Meta

Source

See Implementation

dhtslib sam modules

header

aliases

SAMFile

classes

SAMRecord

enums

SAMWriterTypes

functions

structs