dhtslib ~cigar_and_md_api (2022-01-17T03:42:31.0299165)
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SAMRecord.AlignedPair
dhtslib
sam
SAMRecord
Undocumented in source.
class
SAMRecord
struct
AlignedPair (
bool
refSeq
) {
int
qpos
;
int
rpos
;
Ops
cigar_op
;
char
queryBase
;
static if
(
refSeq
)
char
refBase
;
string
toString
();
}
Members
Functions
toString
string
toString
()
Undocumented in source. Be warned that the author may not have intended to support it.
Variables
cigar_op
Ops
cigar_op
;
Undocumented in source.
qpos
int
qpos
;
Undocumented in source.
queryBase
char
queryBase
;
Undocumented in source.
refBase
char
refBase
;
rpos
int
rpos
;
Undocumented in source.
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sam
SAMRecord
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this
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~this
functions
getAlignedCoordinates
getAlignedPairs
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cigar
flag
insertSize
isMapped
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isReversed
isSecondary
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AlignedPair
variables
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