SAMRecord.getAlignedCoordinates

get aligned coordinates per each cigar op within range range is 0-based half open using chromosomal coordinates

  1. auto getAlignedCoordinates()
  2. auto getAlignedCoordinates(int start, int end)
    class SAMRecord
    getAlignedCoordinates
    (
    int start
    ,
    int end
    )

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