VariantType

Replacement for htslib VCF_*

Values

Value	Meaning
Ref`VCF_REF`	ref (e.g. in a gVCF)
Snp`VCF_SNP`	SNP
Mnp`VCF_MNP`	MNP
Indel`VCF_INDEL`	INDEL
Other`VCF_OTHER`	other (e.g. SV)
Breakend`VCF_BND`	breakend
Overlap`VCF_OVERLAP`	overlapping deletion, ALT=*

Meta

Source

See Implementation

dhtslib vcf modules

aliases

RecordTypeToDType

enums

manifest constants

HeaderTypesStrings

static variables