dhtslib ~dstep2 (2022-03-14T21:51:44.4661389)

HtslibFile.query

dhtslib file file HtslibFile

Query htsFile with tid, start, and end returns an HtslibIterator that has type T requires index be loaded first can use Tabix index or BAI/CSI index

  1. auto query(int tid, long beg, long end)
    struct HtslibFile
    auto
    query
    (
    T
    )
    (
    int tid
    ,
    long beg
    ,
    long end
    )
    if (
    is(T == Bam1) ||
    is(T == Bcf1)
    ||
    is(T == Kstring)
    )
  2. auto query(string region)
  3. auto query(string[] regions)

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dhtslib file file HtslibFile constructorsfunctionspropertiesvariables

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