dhtslib.util

Undocumented in source.

Members

copyBgzf auto copyBgzf(Bgzf fp, const(char)* fn): copy a BGZF
copyBgzf auto copyBgzf(Bgzf fp, off_t offset, const(char)* fn): copy a BGZF with custom offset
copyHtsFile auto copyHtsFile(HtsFile fp): copy a htsFile
copyHtsFile auto copyHtsFile(HtsFile fp, off_t offset): copy a htsFile with custom offset
copyHtsItr auto copyHtsItr(HtsItr itr): deep copy an hts_itr_t htslib really needs a copy/dup function for this
copyKstring auto copyKstring(Kstring str): Copy a kstring_t
getIntervalFromString auto getIntervalFromString(string region): Returns tuple of String and ZBHO coordinates representing input string. Supports htslib coordinate strings. i.e chr1:1-10
initKstring auto initKstring(): create a kstring_t *