htslib.hts_log

Members

Enums

htsLogLevel

enum htsLogLevel

Log levels.

Functions

hts_get_log_level

htsLogLevel hts_get_log_level()

Gets the selected log level.

hts_log

void hts_log(htsLogLevel severity, const(char)* context, const(char)* format, ...)

! Logs an event. \param severity Severity of the event: - HTS_LOG_ERROR means that something went wrong so that a task could not be completed. - HTS_LOG_WARNING means that something unexpected happened, but that execution can continue, perhaps in a degraded mode. - HTS_LOG_INFO means that something normal but significant happened. - HTS_LOG_DEBUG means that something normal and insignificant happened. - HTS_LOG_TRACE means that something happened that might be of interest when troubleshooting. \param context Context where the event occurred. Typically set to "__func__". \param format Format string with placeholders, like printf.

hts_log_debug

void hts_log_debug(const(char)[] ctx, string msg)

! Logs an event with severity HTS_LOG_DEBUG and default context. Parameters: format, ...

hts_log_error

void hts_log_error(const(char)[] ctx, string msg)

! Logs an event with severity HTS_LOG_ERROR and default context. Parameters: format, ...

hts_log_info

void hts_log_info(const(char)[] ctx, string msg)

! Logs an event with severity HTS_LOG_INFO and default context. Parameters: format, ...

hts_log_trace

void hts_log_trace(const(char)[] ctx, string msg)

! Logs an event with severity HTS_LOG_TRACE and default context. Parameters: format, ...

hts_log_warning

void hts_log_warning(const(char)[] ctx, string msg)

! Logs an event with severity HTS_LOG_WARNING and default context. Parameters: format, ...

hts_set_log_level

void hts_set_log_level(htsLogLevel level)

Sets the selected log level.

Static variables

hts_verbose

int hts_verbose;

Selected log level.

• bgzf
• cram
• faidx
• hfile
• hts
• hts_log
• kstring
• regidx
• sam
• tbx
• thread_pool
• vcf