dhtslib ~master (2020-09-09T05:17:46Z)

bcf_update_alleles

htslib vcf

bcf_update_alleles() and bcf_update_alleles_str() - update REF and ALLT column @alleles: Array of alleles @nals: Number of alleles @alleles_string: Comma-separated alleles, starting with the REF allele

  1. int bcf_update_alleles(const(bcf_hdr_t)* hdr, bcf1_t* line, const(char)** alleles, int nals)
    extern (C)
    int
    bcf_update_alleles
    (
    const(bcf_hdr_t)* hdr
    ,
    bcf1_t* line
    ,
    const(char)** alleles
    ,
    int nals
    )
  2. int bcf_update_alleles_str(const(bcf_hdr_t)* hdr, bcf1_t* line, const(char)* alleles_string)

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